Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.89□□□□□ -0.03
NIPAL3Q6P499 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AP005117.1-202ENST00000581724 1908 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 KRT18P58-201ENST00000527480 1120 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AL031432.2-201ENST00000566714 459 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AL928711.1-201ENST00000570165 459 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AL645728.2-201ENST00000641974 660 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AC025580.3-201ENST00000617932 1424 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 AC126177.1-201ENST00000547829 2218 ntBASIC14.88□□□□□ -0.03
NIPAL3Q6P499 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
NIPAL3Q6P499 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 CDC14C-201ENST00000428251 1719 ntBASIC14.87□□□□□ -0.03
NIPAL3Q6P499 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 MIR574-201ENST00000385209 96 ntBASIC14.87□□□□□ -0.03
NIPAL3Q6P499 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 POLD2P1-201ENST00000511220 997 ntBASIC14.87□□□□□ -0.03
NIPAL3Q6P499 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 LINC02447-202ENST00000501888 2146 ntBASIC14.87□□□□□ -0.03
NIPAL3Q6P499 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.87□□□□□ -0.03
NIPAL3Q6P499 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.86□□□□□ -0.03
NIPAL3Q6P499 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms