Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 COMP-203ENST00000542601 2707 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 U82695.1-201ENST00000635752 1889 ntBASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC11.19□□□□□ -0.62
LINC00242Q5T6M2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ARFGAP2-202ENST00000426335 2937 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ARMC10P1-201ENST00000313754 855 ntBASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 DPM2-202ENST00000373110 738 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 TMPOP1-202ENST00000424642 1267 ntBASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ARTN-206ENST00000472435 402 ntTSL 3 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC107918.2-201ENST00000530817 355 ntBASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC004706.3-202ENST00000621574 984 ntBASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC008677.1-201ENST00000519230 1561 ntBASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
LINC00242Q5T6M2 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 LAPTM5-201ENST00000294507 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC11.17□□□□□ -0.62
LINC00242Q5T6M2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms