Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RFX7Q2KHR2 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 EEF1DP4-201ENST00000446006 880 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 ZNF890P-202ENST00000530367 1156 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 AC022188.1-201ENST00000620960 1664 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 AC024909.3-201ENST00000611513 2257 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 AL512638.1-201ENST00000457493 794 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC19.57■□□□□ 0.72
RFX7Q2KHR2 RN7SL828P-201ENST00000607615 303 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 AC004840.1-201ENST00000636359 365 ntBASIC19.57■□□□□ 0.72
RFX7Q2KHR2 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 CDC14C-201ENST00000428251 1719 ntBASIC19.56■□□□□ 0.72
RFX7Q2KHR2 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 CETN4P-206ENST00000642099 2168 ntBASIC19.56■□□□□ 0.72
RFX7Q2KHR2 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RFX7Q2KHR2 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 AC087499.5-201ENST00000452760 1342 ntBASIC19.55■□□□□ 0.72
RFX7Q2KHR2 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 GAPDHP21-201ENST00000450301 1010 ntBASIC19.55■□□□□ 0.72
RFX7Q2KHR2 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.55■□□□□ 0.72
RFX7Q2KHR2 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms