Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
SSBP1Q04837 AC090616.6-203ENST00000579186 1945 ntBASIC13.82□□□□□ -0.2
SSBP1Q04837 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SSBP1Q04837 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
SSBP1Q04837 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
SSBP1Q04837 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.82□□□□□ -0.2
SSBP1Q04837 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 AL390755.1-201ENST00000623716 2027 ntBASIC13.82□□□□□ -0.2
SSBP1Q04837 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
SSBP1Q04837 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 AC096582.2-201ENST00000510860 516 ntBASIC13.82□□□□□ -0.2
SSBP1Q04837 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 AC005412.3-201ENST00000580309 715 ntBASIC13.82□□□□□ -0.2
SSBP1Q04837 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC13.82□□□□□ -0.2
SSBP1Q04837 AL139424.1-201ENST00000607572 797 ntBASIC13.82□□□□□ -0.2
SSBP1Q04837 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC13.82□□□□□ -0.2
SSBP1Q04837 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.82□□□□□ -0.2
SSBP1Q04837 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 CICP23-201ENST00000605013 2741 ntBASIC13.82□□□□□ -0.2
SSBP1Q04837 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
SSBP1Q04837 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
SSBP1Q04837 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 TERF1P1-201ENST00000311003 1181 ntBASIC13.81□□□□□ -0.2
SSBP1Q04837 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP1Q04837 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 CHCHD2P8-201ENST00000429873 447 ntBASIC13.81□□□□□ -0.2
SSBP1Q04837 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP1Q04837 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP1Q04837 BNIP3P18-201ENST00000593976 575 ntBASIC13.81□□□□□ -0.2
SSBP1Q04837 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 BSG-214ENST00000614867 960 ntTSL 3 BASIC13.81□□□□□ -0.2
SSBP1Q04837 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.81□□□□□ -0.2
SSBP1Q04837 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 AC126755.1-201ENST00000525846 6405 ntBASIC13.81□□□□□ -0.2
SSBP1Q04837 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
SSBP1Q04837 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.81□□□□□ -0.2
SSBP1Q04837 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
SSBP1Q04837 REPIN1-209ENST00000479668 3182 ntTSL 2 BASIC13.81□□□□□ -0.2
SSBP1Q04837 AC073508.3-201ENST00000619697 1419 ntBASIC13.81□□□□□ -0.2
SSBP1Q04837 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms