Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 AC004461.1-201ENST00000412461 403 ntBASIC17.76■□□□□ 0.43
CASP4P49662 AC211486.1-202ENST00000416371 468 ntBASIC17.76■□□□□ 0.43
CASP4P49662 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 AC211476.1-201ENST00000503899 468 ntBASIC17.76■□□□□ 0.43
CASP4P49662 GATB-205ENST00000508611 605 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 AC093520.2-201ENST00000561830 333 ntBASIC17.76■□□□□ 0.43
CASP4P49662 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 AL513210.1-201ENST00000629608 234 ntBASIC17.76■□□□□ 0.43
CASP4P49662 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
CASP4P49662 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC17.76■□□□□ 0.43
CASP4P49662 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
CASP4P49662 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CASP4P49662 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CASP4P49662 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
CASP4P49662 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CASP4P49662 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CASP4P49662 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 AC022188.1-201ENST00000620960 1664 ntBASIC17.75■□□□□ 0.43
CASP4P49662 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 MIR648-201ENST00000385046 94 ntBASIC17.75■□□□□ 0.43
CASP4P49662 AL592309.1-201ENST00000443127 649 ntBASIC17.75■□□□□ 0.43
CASP4P49662 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC17.75■□□□□ 0.43
CASP4P49662 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CASP4P49662 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.75■□□□□ 0.43
CASP4P49662 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.75■□□□□ 0.43
CASP4P49662 AC098859.1-201ENST00000502915 1238 ntBASIC17.75■□□□□ 0.43
CASP4P49662 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.75■□□□□ 0.43
CASP4P49662 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.75■□□□□ 0.43
CASP4P49662 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.75■□□□□ 0.43
CASP4P49662 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 AC134684.3-201ENST00000641758 218 ntBASIC17.75■□□□□ 0.43
CASP4P49662 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CASP4P49662 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CASP4P49662 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CASP4P49662 AC008677.1-201ENST00000519230 1561 ntBASIC17.74■□□□□ 0.43
CASP4P49662 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.74■□□□□ 0.43
CASP4P49662 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.74■□□□□ 0.43
CASP4P49662 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CASP4P49662 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CASP4P49662 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.74■□□□□ 0.43
CASP4P49662 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CASP4P49662 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC17.74■□□□□ 0.43
CASP4P49662 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC17.74■□□□□ 0.43
CASP4P49662 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.74■□□□□ 0.43
CASP4P49662 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC17.74■□□□□ 0.43
CASP4P49662 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
CASP4P49662 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.74■□□□□ 0.43
CASP4P49662 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CASP4P49662 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 MIR4321-201ENST00000592276 80 ntBASIC17.74■□□□□ 0.43
CASP4P49662 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.74■□□□□ 0.43
CASP4P49662 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CASP4P49662 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CASP4P49662 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC17.74■□□□□ 0.43
CASP4P49662 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms