Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 AC008741.2-201ENST00000612792 3115 ntBASIC13.93□□□□□ -0.18
CDKN1AP38936 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.93□□□□□ -0.18
CDKN1AP38936 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
CDKN1AP38936 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC13.93□□□□□ -0.18
CDKN1AP38936 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC13.93□□□□□ -0.18
CDKN1AP38936 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC13.92□□□□□ -0.18
CDKN1AP38936 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
CDKN1AP38936 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
CDKN1AP38936 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKN1AP38936 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
CDKN1AP38936 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKN1AP38936 AC009477.1-201ENST00000452936 217 ntBASIC13.92□□□□□ -0.18
CDKN1AP38936 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKN1AP38936 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 CDK4-206ENST00000549606 558 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 BANF1P1-201ENST00000553684 263 ntBASIC13.92□□□□□ -0.18
CDKN1AP38936 AL596325.1-201ENST00000563991 1082 ntBASIC13.92□□□□□ -0.18
CDKN1AP38936 AC009407.1-201ENST00000568958 598 ntBASIC13.92□□□□□ -0.18
CDKN1AP38936 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC13.92□□□□□ -0.18
CDKN1AP38936 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC13.92□□□□□ -0.18
CDKN1AP38936 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 AL391256.1-201ENST00000443260 1855 ntBASIC13.92□□□□□ -0.18
CDKN1AP38936 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.92□□□□□ -0.18
CDKN1AP38936 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
CDKN1AP38936 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
CDKN1AP38936 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
CDKN1AP38936 PCDHB19P-201ENST00000570871 2371 ntBASIC13.91□□□□□ -0.18
CDKN1AP38936 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN1AP38936 AC087499.5-201ENST00000452760 1342 ntBASIC13.91□□□□□ -0.18
CDKN1AP38936 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN1AP38936 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC13.91□□□□□ -0.18
CDKN1AP38936 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN1AP38936 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.91□□□□□ -0.18
CDKN1AP38936 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC13.91□□□□□ -0.18
CDKN1AP38936 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
CDKN1AP38936 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC13.91□□□□□ -0.18
CDKN1AP38936 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN1AP38936 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC13.91□□□□□ -0.18
CDKN1AP38936 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.91□□□□□ -0.18
CDKN1AP38936 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.91□□□□□ -0.18
CDKN1AP38936 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC13.91□□□□□ -0.18
CDKN1AP38936 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.91□□□□□ -0.18
CDKN1AP38936 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
CDKN1AP38936 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC13.91□□□□□ -0.18
CDKN1AP38936 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms