Protein–RNA interactions for Protein: P18433

PTPRA, Receptor-type tyrosine-protein phosphatase alpha, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRAP18433 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
PTPRAP18433 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 CTBP2P5-201ENST00000454986 1264 ntBASIC18.65■□□□□ 0.58
PTPRAP18433 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 NOP2-211ENST00000540228 668 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC18.65■□□□□ 0.58
PTPRAP18433 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC18.65■□□□□ 0.58
PTPRAP18433 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPRAP18433 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC18.65■□□□□ 0.58
PTPRAP18433 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
PTPRAP18433 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
PTPRAP18433 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC18.65■□□□□ 0.58
PTPRAP18433 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC18.64■□□□□ 0.58
PTPRAP18433 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPRAP18433 HCG11-201ENST00000411553 5696 ntBASIC18.64■□□□□ 0.57
PTPRAP18433 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 LBX2-201ENST00000341396 886 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 PKIG-203ENST00000372887 769 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 STX1A-203ENST00000395155 783 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPRAP18433 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
PTPRAP18433 TDH-203ENST00000531764 1110 ntBASIC18.64■□□□□ 0.57
PTPRAP18433 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.64■□□□□ 0.57
PTPRAP18433 MIR4525-201ENST00000580000 75 ntBASIC18.64■□□□□ 0.57
PTPRAP18433 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC18.64■□□□□ 0.57
PTPRAP18433 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC18.64■□□□□ 0.57
PTPRAP18433 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 PLA2G2D-202ENST00000617227 1856 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
PTPRAP18433 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPRAP18433 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC18.64■□□□□ 0.57
PTPRAP18433 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
PTPRAP18433 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.63■□□□□ 0.57
PTPRAP18433 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
PTPRAP18433 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC18.63■□□□□ 0.57
PTPRAP18433 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
PTPRAP18433 KLF2P4-201ENST00000451959 1225 ntBASIC18.63■□□□□ 0.57
PTPRAP18433 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
PTPRAP18433 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC18.63■□□□□ 0.57
PTPRAP18433 AL583810.1-201ENST00000553344 1045 ntBASIC18.63■□□□□ 0.57
PTPRAP18433 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
PTPRAP18433 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms