Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CD48P09326 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD48P09326 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CD48P09326 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
CD48P09326 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
CD48P09326 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.88■□□□□ 0.29
CD48P09326 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.88■□□□□ 0.29
CD48P09326 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.88■□□□□ 0.29
CD48P09326 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 TFAMP1-201ENST00000412727 736 ntBASIC16.88■□□□□ 0.29
CD48P09326 MCCD1P2-201ENST00000423228 335 ntBASIC16.88■□□□□ 0.29
CD48P09326 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.88■□□□□ 0.29
CD48P09326 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 PMS2P7-201ENST00000506558 1336 ntBASIC16.88■□□□□ 0.29
CD48P09326 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CD48P09326 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
CD48P09326 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.88■□□□□ 0.29
CD48P09326 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.88■□□□□ 0.29
CD48P09326 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 AP005117.1-202ENST00000581724 1908 ntBASIC16.88■□□□□ 0.29
CD48P09326 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CD48P09326 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CD48P09326 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CD48P09326 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.87■□□□□ 0.29
CD48P09326 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC16.87■□□□□ 0.29
CD48P09326 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC16.87■□□□□ 0.29
CD48P09326 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 ALG1L5P-201ENST00000482043 771 ntBASIC16.87■□□□□ 0.29
CD48P09326 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.87■□□□□ 0.29
CD48P09326 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC16.87■□□□□ 0.29
CD48P09326 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.87■□□□□ 0.29
CD48P09326 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC16.87■□□□□ 0.29
CD48P09326 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.87■□□□□ 0.29
CD48P09326 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.87■□□□□ 0.29
CD48P09326 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.87■□□□□ 0.29
CD48P09326 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CD48P09326 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
CD48P09326 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CD48P09326 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.86■□□□□ 0.29
CD48P09326 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms