Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 NME2P1-201ENST00000426182 414 ntBASIC19.1■□□□□ 0.65
HLA-DOAP06340 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 AC004461.2-201ENST00000629517 803 ntBASIC19.1■□□□□ 0.65
HLA-DOAP06340 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DOAP06340 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DOAP06340 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 NF2-208ENST00000403435 2568 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 AC106886.4-201ENST00000623557 2502 ntBASIC19.09■□□□□ 0.65
HLA-DOAP06340 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 COX5BP8-201ENST00000416911 349 ntBASIC19.09■□□□□ 0.65
HLA-DOAP06340 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 PTK7-212ENST00000476760 902 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 FXR1-221ENST00000491674 365 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 SRD5A3P1-201ENST00000603021 949 ntBASIC19.09■□□□□ 0.65
HLA-DOAP06340 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DOAP06340 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DOAP06340 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC19.08■□□□□ 0.65
HLA-DOAP06340 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DOAP06340 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DOAP06340 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DOAP06340 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.08■□□□□ 0.65
HLA-DOAP06340 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
HLA-DOAP06340 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 CD81-207ENST00000481687 890 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 AC004790.1-201ENST00000612686 536 ntBASIC19.08■□□□□ 0.64
HLA-DOAP06340 SRP9-204ENST00000619790 377 ntTSL 2 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 CU639417.3-201ENST00000624240 1404 ntBASIC19.08■□□□□ 0.64
HLA-DOAP06340 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC19.08■□□□□ 0.64
HLA-DOAP06340 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
HLA-DOAP06340 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms