Protein–RNA interactions for Protein: P00352

ALDH1A1, Retinal dehydrogenase 1, humanhuman

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A1P00352 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC074338.1-201ENST00000416825 156 ntBASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC007969.1-201ENST00000433675 447 ntBASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC005077.2-201ENST00000449786 690 ntBASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 ADM-202ENST00000524948 584 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC243562.2-201ENST00000561247 970 ntBASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 GGT4P-201ENST00000623672 1708 ntBASIC18.35■□□□□ 0.53
ALDH1A1P00352 AC005622.1-201ENST00000636801 1703 ntBASIC18.35■□□□□ 0.53
ALDH1A1P00352 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ALDH1A1P00352 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.35■□□□□ 0.53
ALDH1A1P00352 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 HINT2P1-201ENST00000419438 481 ntBASIC18.34■□□□□ 0.53
ALDH1A1P00352 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 AC105129.2-201ENST00000559536 390 ntBASIC18.34■□□□□ 0.53
ALDH1A1P00352 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 AC025279.2-201ENST00000569730 653 ntBASIC18.34■□□□□ 0.53
ALDH1A1P00352 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC18.34■□□□□ 0.53
ALDH1A1P00352 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ALDH1A1P00352 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
ALDH1A1P00352 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A1P00352 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A1P00352 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A1P00352 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A1P00352 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A1P00352 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ALDH1A1P00352 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.33■□□□□ 0.53
ALDH1A1P00352 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 CSH2-202ENST00000345366 598 ntTSL 5 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 FNTAP2-201ENST00000430308 634 ntBASIC18.33■□□□□ 0.52
ALDH1A1P00352 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 USP40-206ENST00000443711 628 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 CCDC153-204ENST00000503566 1295 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 AP006547.1-201ENST00000563435 692 ntBASIC18.33■□□□□ 0.52
ALDH1A1P00352 NAT9-222ENST00000583476 583 ntTSL 3 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 NAT9-224ENST00000583757 583 ntTSL 3 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 PCGF3-213ENST00000620529 1899 ntBASIC18.33■□□□□ 0.52
ALDH1A1P00352 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ALDH1A1P00352 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ALDH1A1P00352 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms