Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 MYB-242ENST00000618728 3545 ntTSL 5 BASIC13.7□□□□□ -0.22
ABCA1O95477 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC13.7□□□□□ -0.22
ABCA1O95477 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
ABCA1O95477 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ABCA1O95477 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC13.7□□□□□ -0.22
ABCA1O95477 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC13.7□□□□□ -0.22
ABCA1O95477 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.7□□□□□ -0.22
ABCA1O95477 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC13.7□□□□□ -0.22
ABCA1O95477 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC13.7□□□□□ -0.22
ABCA1O95477 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ABCA1O95477 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.7□□□□□ -0.22
ABCA1O95477 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ABCA1O95477 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC13.69□□□□□ -0.22
ABCA1O95477 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
ABCA1O95477 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 FRMD8P1-201ENST00000440433 1524 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC13.69□□□□□ -0.22
ABCA1O95477 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 AC022494.1-201ENST00000466044 728 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC13.69□□□□□ -0.22
ABCA1O95477 MIR4492-201ENST00000581627 80 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 AL033527.4-201ENST00000641026 673 ntBASIC13.69□□□□□ -0.22
ABCA1O95477 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC13.69□□□□□ -0.22
ABCA1O95477 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
ABCA1O95477 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
ABCA1O95477 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
ABCA1O95477 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC13.68□□□□□ -0.22
ABCA1O95477 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
ABCA1O95477 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms