Protein–RNA interactions for Protein: O00526

UPK2, Uroplakin-2, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK2O00526 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC13.11□□□□□ -0.31
UPK2O00526 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
UPK2O00526 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 FLJ16779-201ENST00000612722 7638 ntBASIC13.1□□□□□ -0.31
UPK2O00526 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 RASGRP2-201ENST00000354024 2310 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 CSF3-203ENST00000394148 622 ntTSL 3 BASIC13.1□□□□□ -0.31
UPK2O00526 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 KRT18P34-201ENST00000488218 1270 ntBASIC13.1□□□□□ -0.31
UPK2O00526 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 AC109635.5-201ENST00000533593 962 ntBASIC13.1□□□□□ -0.31
UPK2O00526 THTPA-204ENST00000554970 569 ntTSL 4 BASIC13.1□□□□□ -0.31
UPK2O00526 THTPA-206ENST00000556015 535 ntTSL 3 BASIC13.1□□□□□ -0.31
UPK2O00526 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 AC104692.2-201ENST00000603054 253 ntBASIC13.1□□□□□ -0.31
UPK2O00526 AL009183.1-201ENST00000603760 355 ntBASIC13.1□□□□□ -0.31
UPK2O00526 AC007064.4-201ENST00000637740 555 ntBASIC13.1□□□□□ -0.31
UPK2O00526 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.1□□□□□ -0.31
UPK2O00526 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
UPK2O00526 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.1□□□□□ -0.31
UPK2O00526 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 HAUS4P1-201ENST00000406739 1145 ntBASIC13.09□□□□□ -0.31
UPK2O00526 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 RHOQP3-201ENST00000437982 621 ntBASIC13.09□□□□□ -0.31
UPK2O00526 RNA5SP415-201ENST00000517246 115 ntBASIC13.09□□□□□ -0.31
UPK2O00526 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 AC008677.1-201ENST00000519230 1561 ntBASIC13.09□□□□□ -0.31
UPK2O00526 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 CFL1-202ENST00000524553 860 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 NORAD-201ENST00000565493 5339 ntBASIC13.09□□□□□ -0.31
UPK2O00526 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 LITAF-211ENST00000572255 516 ntTSL 4 BASIC13.09□□□□□ -0.31
UPK2O00526 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
UPK2O00526 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 AC010507.1-201ENST00000633895 436 ntBASIC13.09□□□□□ -0.31
UPK2O00526 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC13.09□□□□□ -0.31
UPK2O00526 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
UPK2O00526 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
UPK2O00526 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC13.09□□□□□ -0.31
UPK2O00526 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UPK2O00526 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
UPK2O00526 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms