Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SSBP4Q9BWG4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 LINC02447-202ENST00000501888 2146 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CICP24-201ENST00000605464 2705 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ST20-AS1-201ENST00000560255 4223 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ACTG1P4-201ENST00000425123 1122 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AC117947.1-201ENST00000427448 529 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AC011840.4-201ENST00000578471 627 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AL592071.1-201ENST00000611956 408 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AL359258.3-201ENST00000622910 2331 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TMEM191A-211ENST00000637163 1067 ntBASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
SSBP4Q9BWG4 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 CDC14C-201ENST00000428251 1719 ntBASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
SSBP4Q9BWG4 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms