Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 UNC93B7-201ENST00000509439 705 ntBASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 ACTL9-202ENST00000612068 1252 ntBASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CHAMP1Q96JM3 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 COCH-203ENST00000460581 2688 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 AC092919.2-201ENST00000623631 1645 ntBASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 CICP24-201ENST00000605464 2705 ntBASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CHAMP1Q96JM3 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 API5-202ENST00000420461 2009 ntTSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 AC106881.1-201ENST00000605849 3329 ntBASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 LAGE3P1-201ENST00000425356 484 ntBASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 MPP2-208ENST00000520305 2111 ntTSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 AC091304.2-201ENST00000564639 760 ntBASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CHAMP1Q96JM3 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms