Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 AC018695.7-201ENST00000624587 2492 ntBASIC16.6■□□□□ 0.25
CHPFQ8IZ52 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CHPFQ8IZ52 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AC106886.4-201ENST00000623557 2502 ntBASIC16.59■□□□□ 0.25
CHPFQ8IZ52 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AL031731.1-201ENST00000642131 2094 ntBASIC16.59■□□□□ 0.25
CHPFQ8IZ52 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 SPTLC1P1-201ENST00000447199 261 ntBASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AL133215.2-201ENST00000609242 977 ntBASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
CHPFQ8IZ52 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CHPFQ8IZ52 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
CHPFQ8IZ52 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
CHPFQ8IZ52 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.58■□□□□ 0.25
CHPFQ8IZ52 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.58■□□□□ 0.25
CHPFQ8IZ52 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CHPFQ8IZ52 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 CENPM-206ENST00000407253 818 ntTSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 GAPDHP21-201ENST00000450301 1010 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 TMPRSS11CP-201ENST00000453277 683 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 CCDC74BP1-201ENST00000508880 1123 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AC009407.1-201ENST00000568958 598 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 SPDYE22P-201ENST00000582158 798 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AL844908.2-201ENST00000609461 460 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AC008738.7-201ENST00000609744 511 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AC025048.6-201ENST00000634326 1161 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AL589702.1-201ENST00000641229 1509 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 UBALD1-205ENST00000590891 2641 ntBASIC16.58■□□□□ 0.24
CHPFQ8IZ52 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
CHPFQ8IZ52 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
CHPFQ8IZ52 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHPFQ8IZ52 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHPFQ8IZ52 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
CHPFQ8IZ52 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.57■□□□□ 0.24
CHPFQ8IZ52 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.57■□□□□ 0.24
CHPFQ8IZ52 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms