Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 AC234783.1-201ENST00000441761 496 ntBASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
TMEFF1Q8IYR6 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 AL139010.1-201ENST00000454878 894 ntBASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 WFDC1-204ENST00000613603 549 ntBASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 AC022211.2-201ENST00000585075 2527 ntBASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
TMEFF1Q8IYR6 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AC007389.4-201ENST00000454674 793 ntBASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AC092658.1-201ENST00000505836 891 ntBASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 GPAA1P2-202ENST00000606848 1787 ntBASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.12■□□□□ 0.17
TMEFF1Q8IYR6 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms