Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 AL671277.1-201ENST00000429656 993 ntBASIC14.79□□□□□ -0.04
ATG4DQ86TL0 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 AC245100.5-201ENST00000452108 331 ntBASIC14.79□□□□□ -0.04
ATG4DQ86TL0 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 AC008677.1-201ENST00000519230 1561 ntBASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 AL135744.1-201ENST00000565098 629 ntBASIC14.79□□□□□ -0.04
ATG4DQ86TL0 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
ATG4DQ86TL0 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 TFAMP1-201ENST00000412727 736 ntBASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 ADH5P3-201ENST00000433842 1137 ntBASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AP006288.1-201ENST00000446065 395 ntBASIC14.78□□□□□ -0.04
ATG4DQ86TL0 CEND1P1-201ENST00000451006 455 ntBASIC14.78□□□□□ -0.04
ATG4DQ86TL0 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 ELL2P1-201ENST00000413990 1906 ntBASIC14.78□□□□□ -0.04
ATG4DQ86TL0 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.78□□□□□ -0.04
ATG4DQ86TL0 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.77□□□□□ -0.04
ATG4DQ86TL0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms