Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 RNU1-129P-201ENST00000384064 167 ntBASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 RPSAP43-201ENST00000402237 625 ntBASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 GPX1P2-201ENST00000429271 606 ntBASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 AC112482.1-201ENST00000492080 688 ntBASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 U1.21-201ENST00000580816 167 ntBASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 AC091812.2-201ENST00000619081 385 ntBASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.57■□□□□ 0.24
KHDC1Q4VXA5 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 GCK-202ENST00000345378 2421 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AC140658.5-201ENST00000438532 169 ntBASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 MTDHP5-201ENST00000598980 586 ntBASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 AMT-206ENST00000458307 1860 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
KHDC1Q4VXA5 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 KRT18P13-201ENST00000400056 1290 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 UPF3AP3-201ENST00000420996 769 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 FAM58CP-201ENST00000435741 640 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 MTRF1LP2-201ENST00000506027 1122 ntBASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC16.55■□□□□ 0.24
KHDC1Q4VXA5 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.5 ms