Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 HIST1H3D-201ENST00000356476 411 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PRAMEP78395 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEP78395 AC026396.1-201ENST00000419388 421 ntBASIC16.53■□□□□ 0.24
PRAMEP78395 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEP78395 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEP78395 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.53■□□□□ 0.24
PRAMEP78395 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC16.53■□□□□ 0.24
PRAMEP78395 AL009183.1-201ENST00000603760 355 ntBASIC16.53■□□□□ 0.24
PRAMEP78395 CAND2-206ENST00000626378 333 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC16.53■□□□□ 0.24
PRAMEP78395 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.53■□□□□ 0.24
PRAMEP78395 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PRAMEP78395 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PRAMEP78395 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEP78395 AL596087.1-201ENST00000400979 1969 ntBASIC16.52■□□□□ 0.24
PRAMEP78395 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PRAMEP78395 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEP78395 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.52■□□□□ 0.24
PRAMEP78395 RNA5SP416-201ENST00000516838 111 ntBASIC16.52■□□□□ 0.24
PRAMEP78395 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.52■□□□□ 0.24
PRAMEP78395 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC16.52■□□□□ 0.24
PRAMEP78395 AC109635.5-201ENST00000533593 962 ntBASIC16.52■□□□□ 0.24
PRAMEP78395 KRT19P2-202ENST00000557173 1012 ntBASIC16.52■□□□□ 0.24
PRAMEP78395 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEP78395 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.52■□□□□ 0.24
PRAMEP78395 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PRAMEP78395 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.52■□□□□ 0.24
PRAMEP78395 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
PRAMEP78395 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
PRAMEP78395 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEP78395 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC16.52■□□□□ 0.23
PRAMEP78395 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PRAMEP78395 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEP78395 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PRAMEP78395 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 REXO1L8P-201ENST00000604378 1897 ntBASIC16.51■□□□□ 0.23
PRAMEP78395 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
PRAMEP78395 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC16.51■□□□□ 0.23
PRAMEP78395 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC16.51■□□□□ 0.23
PRAMEP78395 AL591424.1-201ENST00000442569 1213 ntBASIC16.51■□□□□ 0.23
PRAMEP78395 KRT18P2-201ENST00000447938 1258 ntBASIC16.51■□□□□ 0.23
PRAMEP78395 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PRAMEP78395 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms