Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC16.48■□□□□ 0.23
LIMK2P53671 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.48■□□□□ 0.23
LIMK2P53671 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
LIMK2P53671 CDC14C-201ENST00000428251 1719 ntBASIC16.48■□□□□ 0.23
LIMK2P53671 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LIMK2P53671 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LIMK2P53671 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC16.47■□□□□ 0.23
LIMK2P53671 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 AC012569.1-201ENST00000591191 1524 ntBASIC16.47■□□□□ 0.23
LIMK2P53671 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
LIMK2P53671 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.47■□□□□ 0.23
LIMK2P53671 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 AC068137.2-201ENST00000605408 478 ntBASIC16.47■□□□□ 0.23
LIMK2P53671 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.47■□□□□ 0.23
LIMK2P53671 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 AC091812.2-201ENST00000619081 385 ntBASIC16.47■□□□□ 0.23
LIMK2P53671 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.47■□□□□ 0.23
LIMK2P53671 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.47■□□□□ 0.23
LIMK2P53671 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.47■□□□□ 0.23
LIMK2P53671 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
LIMK2P53671 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
LIMK2P53671 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 LINC02447-202ENST00000501888 2146 ntBASIC16.46■□□□□ 0.23
LIMK2P53671 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LIMK2P53671 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LIMK2P53671 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
LIMK2P53671 DDT-204ENST00000404092 805 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK2P53671 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.46■□□□□ 0.23
LIMK2P53671 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK2P53671 AL513480.1-201ENST00000451731 511 ntBASIC16.46■□□□□ 0.23
LIMK2P53671 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.46■□□□□ 0.23
LIMK2P53671 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
LIMK2P53671 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
LIMK2P53671 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC16.46■□□□□ 0.23
LIMK2P53671 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms