Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.38■□□□□ 0.53
USP11P51784 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.38■□□□□ 0.53
USP11P51784 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 MIR648-201ENST00000385046 94 ntBASIC18.38■□□□□ 0.53
USP11P51784 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.38■□□□□ 0.53
USP11P51784 AC107890.1-201ENST00000422478 521 ntBASIC18.38■□□□□ 0.53
USP11P51784 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 AC027796.2-201ENST00000575326 344 ntBASIC18.38■□□□□ 0.53
USP11P51784 GPER1-207ENST00000619052 571 ntTSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.38■□□□□ 0.53
USP11P51784 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
USP11P51784 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC18.38■□□□□ 0.53
USP11P51784 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.38■□□□□ 0.53
USP11P51784 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
USP11P51784 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
USP11P51784 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
USP11P51784 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 BAD-202ENST00000394531 631 ntTSL 3 BASIC18.37■□□□□ 0.53
USP11P51784 RBM39-205ENST00000397370 612 ntTSL 2 BASIC18.37■□□□□ 0.53
USP11P51784 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.37■□□□□ 0.53
USP11P51784 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 AC125807.1-201ENST00000483097 614 ntBASIC18.37■□□□□ 0.53
USP11P51784 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC18.37■□□□□ 0.53
USP11P51784 BAD-207ENST00000544785 525 ntTSL 3 BASIC18.37■□□□□ 0.53
USP11P51784 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC18.37■□□□□ 0.53
USP11P51784 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 AL691432.1-201ENST00000596308 1422 ntBASIC18.37■□□□□ 0.53
USP11P51784 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC18.37■□□□□ 0.53
USP11P51784 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
USP11P51784 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.37■□□□□ 0.53
USP11P51784 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC18.37■□□□□ 0.53
USP11P51784 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
USP11P51784 POLR3GL-202ENST00000369314 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 HAUS4P1-201ENST00000406739 1145 ntBASIC18.36■□□□□ 0.53
USP11P51784 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 CYMP-203ENST00000474680 1263 ntBASIC18.36■□□□□ 0.53
USP11P51784 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
USP11P51784 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC18.36■□□□□ 0.53
USP11P51784 SATB1-217ENST00000493952 626 ntTSL 3 BASIC18.36■□□□□ 0.53
USP11P51784 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.36■□□□□ 0.53
USP11P51784 AC069120.2-201ENST00000524091 540 ntBASIC18.36■□□□□ 0.53
USP11P51784 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.36■□□□□ 0.53
USP11P51784 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.36■□□□□ 0.53
USP11P51784 ORC5-208ENST00000626700 344 ntTSL 3 BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms