Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
PTPN7P35236 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.87■□□□□ 0.29
PTPN7P35236 WASH6P-202ENST00000359512 1437 ntBASIC16.87■□□□□ 0.29
PTPN7P35236 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.87■□□□□ 0.29
PTPN7P35236 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PTPN7P35236 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 NFIC-211ENST00000641145 8399 ntBASIC16.86■□□□□ 0.29
PTPN7P35236 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
PTPN7P35236 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN7P35236 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN7P35236 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 AC126177.1-201ENST00000547829 2218 ntBASIC16.86■□□□□ 0.29
PTPN7P35236 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN7P35236 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN7P35236 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN7P35236 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN7P35236 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PTPN7P35236 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN7P35236 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTPN7P35236 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 C22orf39-201ENST00000333059 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTPN7P35236 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN7P35236 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN7P35236 PP7080-204ENST00000510714 601 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN7P35236 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN7P35236 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN7P35236 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 AL161645.1-201ENST00000622716 1255 ntBASIC16.85■□□□□ 0.29
PTPN7P35236 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN7P35236 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
PTPN7P35236 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 AC104109.2-201ENST00000602919 1418 ntBASIC16.85■□□□□ 0.29
PTPN7P35236 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 AP001282.1-201ENST00000531301 1499 ntBASIC16.85■□□□□ 0.29
PTPN7P35236 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN7P35236 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN7P35236 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN7P35236 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN7P35236 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN7P35236 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN7P35236 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN7P35236 LBH-204ENST00000406087 559 ntTSL 4 BASIC16.84■□□□□ 0.29
PTPN7P35236 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN7P35236 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PTPN7P35236 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN7P35236 PRYP6-201ENST00000514804 343 ntBASIC16.84■□□□□ 0.29
PTPN7P35236 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN7P35236 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.84■□□□□ 0.29
PTPN7P35236 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms