Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CD40LGP29965 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
CD40LGP29965 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.54□□□□□ -0.08
CD40LGP29965 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC14.54□□□□□ -0.08
CD40LGP29965 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CD40LGP29965 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 AC091951.1-201ENST00000512854 2465 ntBASIC14.53□□□□□ -0.08
CD40LGP29965 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.53□□□□□ -0.08
CD40LGP29965 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC14.53□□□□□ -0.08
CD40LGP29965 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.53□□□□□ -0.08
CD40LGP29965 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC14.53□□□□□ -0.08
CD40LGP29965 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 TBC1D3P5-201ENST00000579401 1545 ntBASIC14.53□□□□□ -0.08
CD40LGP29965 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.53□□□□□ -0.08
CD40LGP29965 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC14.53□□□□□ -0.08
CD40LGP29965 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 PPOX-219ENST00000544598 813 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 MIR3917-201ENST00000580971 93 ntBASIC14.53□□□□□ -0.08
CD40LGP29965 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 GXYLT1P4-201ENST00000613576 1192 ntBASIC14.53□□□□□ -0.08
CD40LGP29965 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.53□□□□□ -0.08
CD40LGP29965 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CD40LGP29965 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC14.53□□□□□ -0.08
CD40LGP29965 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CD40LGP29965 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CD40LGP29965 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CD40LGP29965 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CD40LGP29965 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CD40LGP29965 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.52□□□□□ -0.08
CD40LGP29965 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CD40LGP29965 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 AC010460.3-201ENST00000511359 1579 ntBASIC14.52□□□□□ -0.08
CD40LGP29965 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
CD40LGP29965 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 PARN-202ENST00000420015 2360 ntTSL 2 BASIC14.52□□□□□ -0.08
CD40LGP29965 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CD40LGP29965 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 TERF1P1-201ENST00000311003 1181 ntBASIC14.52□□□□□ -0.09
CD40LGP29965 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 Telomerase-vert.1-201ENST00000363312 438 ntBASIC14.52□□□□□ -0.09
CD40LGP29965 AC005521.1-201ENST00000393351 872 ntBASIC14.52□□□□□ -0.09
CD40LGP29965 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC14.52□□□□□ -0.09
CD40LGP29965 AC092647.4-201ENST00000457211 535 ntBASIC14.52□□□□□ -0.09
CD40LGP29965 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
CD40LGP29965 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.09
CD40LGP29965 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.52□□□□□ -0.09
CD40LGP29965 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CD40LGP29965 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CD40LGP29965 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC14.52□□□□□ -0.09
CD40LGP29965 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms