Protein–RNA interactions for Protein: P19013

KRT4, Keratin, type II cytoskeletal 4, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4P19013 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.44■□□□□ 0.22
KRT4P19013 BCL10-202ENST00000620248 774 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 AC004706.3-202ENST00000621574 984 ntBASIC16.44■□□□□ 0.22
KRT4P19013 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.44■□□□□ 0.22
KRT4P19013 DKFZP434H168-201ENST00000567381 1905 ntBASIC16.44■□□□□ 0.22
KRT4P19013 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 AC099063.4-201ENST00000641099 1602 ntBASIC16.44■□□□□ 0.22
KRT4P19013 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
KRT4P19013 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.44■□□□□ 0.22
KRT4P19013 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC16.44■□□□□ 0.22
KRT4P19013 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
KRT4P19013 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
KRT4P19013 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT4P19013 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.43■□□□□ 0.22
KRT4P19013 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT4P19013 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT4P19013 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT4P19013 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 RPS15-207ENST00000591032 550 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT4P19013 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.43■□□□□ 0.22
KRT4P19013 NPAP1P7-201ENST00000613027 823 ntBASIC16.43■□□□□ 0.22
KRT4P19013 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.43■□□□□ 0.22
KRT4P19013 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
KRT4P19013 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT4P19013 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT4P19013 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 AC092919.2-201ENST00000623631 1645 ntBASIC16.43■□□□□ 0.22
KRT4P19013 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.43■□□□□ 0.22
KRT4P19013 SLC9A3P2-201ENST00000447821 2021 ntBASIC16.43■□□□□ 0.22
KRT4P19013 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
KRT4P19013 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT4P19013 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT4P19013 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 RBM17P3-201ENST00000417687 1192 ntBASIC16.42■□□□□ 0.22
KRT4P19013 ISCU-203ENST00000431221 799 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.42■□□□□ 0.22
KRT4P19013 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.42■□□□□ 0.22
KRT4P19013 AC138894.3-201ENST00000603787 634 ntBASIC16.42■□□□□ 0.22
KRT4P19013 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC16.42■□□□□ 0.22
KRT4P19013 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.42■□□□□ 0.22
KRT4P19013 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
KRT4P19013 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms