Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.14■□□□□ 0.33
PDGFRAP16234 AC254562.1-201ENST00000417586 456 ntBASIC17.14■□□□□ 0.33
PDGFRAP16234 CNN2P11-201ENST00000429351 262 ntBASIC17.14■□□□□ 0.33
PDGFRAP16234 ADH5P3-201ENST00000433842 1137 ntBASIC17.14■□□□□ 0.33
PDGFRAP16234 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC17.14■□□□□ 0.33
PDGFRAP16234 AC092183.1-201ENST00000469884 875 ntBASIC17.14■□□□□ 0.33
PDGFRAP16234 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
PDGFRAP16234 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
PDGFRAP16234 INO80E-210ENST00000567705 880 ntTSL 3 BASIC17.14■□□□□ 0.33
PDGFRAP16234 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC17.14■□□□□ 0.33
PDGFRAP16234 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.14■□□□□ 0.33
PDGFRAP16234 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PDGFRAP16234 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 URGCP-206ENST00000446958 365 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 SPDYE11-202ENST00000450699 704 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 TIMM8BP1-201ENST00000452384 211 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 RN7SL589P-201ENST00000481268 310 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.13■□□□□ 0.33
PDGFRAP16234 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.13■□□□□ 0.33
PDGFRAP16234 AC243562.1-201ENST00000560672 389 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 SPDYE9P-201ENST00000570642 692 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 AC026120.1-201ENST00000611536 926 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 SPDYE10P-202ENST00000612005 668 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 SPDYE8P-202ENST00000612377 668 ntBASIC17.13■□□□□ 0.33
PDGFRAP16234 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.13■□□□□ 0.33
PDGFRAP16234 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
PDGFRAP16234 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.13■□□□□ 0.33
PDGFRAP16234 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.13■□□□□ 0.33
PDGFRAP16234 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC17.12■□□□□ 0.33
PDGFRAP16234 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
PDGFRAP16234 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms