Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 AC007292.2-201ENST00000593524 1812 ntBASIC18.38■□□□□ 0.53
TPM3P06753 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 AC020658.6-201ENST00000623564 1870 ntBASIC18.38■□□□□ 0.53
TPM3P06753 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 ABCD1P5-201ENST00000445663 754 ntBASIC18.38■□□□□ 0.53
TPM3P06753 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 DUX4L26-201ENST00000489078 1255 ntBASIC18.38■□□□□ 0.53
TPM3P06753 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.38■□□□□ 0.53
TPM3P06753 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.38■□□□□ 0.53
TPM3P06753 LINC01023-201ENST00000606054 436 ntBASIC18.38■□□□□ 0.53
TPM3P06753 AL121956.5-201ENST00000625261 221 ntBASIC18.38■□□□□ 0.53
TPM3P06753 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
TPM3P06753 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC18.38■□□□□ 0.53
TPM3P06753 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TPM3P06753 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
TPM3P06753 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TPM3P06753 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM3P06753 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 REXO1L8P-201ENST00000604378 1897 ntBASIC18.37■□□□□ 0.53
TPM3P06753 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 AL109954.1-202ENST00000564051 2148 ntBASIC18.37■□□□□ 0.53
TPM3P06753 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM3P06753 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 PPIH-202ENST00000372549 327 ntTSL 3 BASIC18.37■□□□□ 0.53
TPM3P06753 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TPM3P06753 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM3P06753 TSSC2-201ENST00000450217 709 ntBASIC18.37■□□□□ 0.53
TPM3P06753 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM3P06753 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM3P06753 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
TPM3P06753 SIGLEC29P-201ENST00000599873 1114 ntBASIC18.37■□□□□ 0.53
TPM3P06753 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM3P06753 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
TPM3P06753 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 NCF1C-201ENST00000438382 1427 ntBASIC18.37■□□□□ 0.53
TPM3P06753 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC18.37■□□□□ 0.53
TPM3P06753 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC18.37■□□□□ 0.53
TPM3P06753 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
TPM3P06753 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TPM3P06753 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM3P06753 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
TPM3P06753 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TPM3P06753 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TPM3P06753 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM3P06753 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TPM3P06753 TOB2P1-201ENST00000469761 992 ntBASIC18.36■□□□□ 0.53
TPM3P06753 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.36■□□□□ 0.53
TPM3P06753 SNX33P1-201ENST00000592116 1762 ntBASIC18.36■□□□□ 0.53
TPM3P06753 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TPM3P06753 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC18.36■□□□□ 0.53
TPM3P06753 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
TPM3P06753 AC097376.2-205ENST00000610159 5334 ntBASIC18.36■□□□□ 0.53
TPM3P06753 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
TPM3P06753 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
TPM3P06753 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
TPM3P06753 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
TPM3P06753 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC18.35■□□□□ 0.53
TPM3P06753 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TPM3P06753 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC18.35■□□□□ 0.53
TPM3P06753 PCGF3-213ENST00000620529 1899 ntBASIC18.35■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms