Protein–RNA interactions for Protein: O95503

CBX6, Chromobox protein homolog 6, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX6O95503 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 HSF5-201ENST00000323777 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.36■□□□□ 0.21
CBX6O95503 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.36■□□□□ 0.21
CBX6O95503 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.36■□□□□ 0.21
CBX6O95503 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.36■□□□□ 0.21
CBX6O95503 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 AC027601.4-201ENST00000611259 610 ntBASIC16.36■□□□□ 0.21
CBX6O95503 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 SLC37A1-201ENST00000352133 3664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.36■□□□□ 0.21
CBX6O95503 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
CBX6O95503 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
CBX6O95503 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
CBX6O95503 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 FAM45BP-202ENST00000592932 1624 ntBASIC16.35■□□□□ 0.21
CBX6O95503 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 AC023157.3-201ENST00000619086 2088 ntBASIC16.35■□□□□ 0.21
CBX6O95503 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.35■□□□□ 0.21
CBX6O95503 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.35■□□□□ 0.21
CBX6O95503 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC16.35■□□□□ 0.21
CBX6O95503 IGHV3-22-201ENST00000520721 359 ntBASIC16.35■□□□□ 0.21
CBX6O95503 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC16.35■□□□□ 0.21
CBX6O95503 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.35■□□□□ 0.21
CBX6O95503 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 AC005336.2-201ENST00000593183 939 ntBASIC16.35■□□□□ 0.21
CBX6O95503 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC16.35■□□□□ 0.21
CBX6O95503 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.35■□□□□ 0.21
CBX6O95503 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.35■□□□□ 0.21
CBX6O95503 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
CBX6O95503 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 AC009336.1-201ENST00000608941 1553 ntBASIC16.34■□□□□ 0.21
CBX6O95503 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
CBX6O95503 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 AC112504.1-201ENST00000623415 1841 ntBASIC16.34■□□□□ 0.21
CBX6O95503 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX6O95503 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.34■□□□□ 0.21
CBX6O95503 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.34■□□□□ 0.21
CBX6O95503 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
CBX6O95503 AP001269.4-201ENST00000609611 512 ntBASIC16.34■□□□□ 0.21
CBX6O95503 FAM197Y3-203ENST00000618346 717 ntBASIC16.34■□□□□ 0.21
CBX6O95503 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.34■□□□□ 0.21
CBX6O95503 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CBX6O95503 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CBX6O95503 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
CBX6O95503 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms