Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 OR5AU1-201ENST00000304418 1199 ntAPPRIS P1 BASIC22.74■■□□□ 1.23
MSH5O43196 C2orf76-203ENST00000409523 747 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
MSH5O43196 RPS3AP25-201ENST00000411660 793 ntBASIC22.74■■□□□ 1.23
MSH5O43196 Z80107.1-201ENST00000436830 412 ntBASIC22.74■■□□□ 1.23
MSH5O43196 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC22.74■■□□□ 1.23
MSH5O43196 AL606517.1-201ENST00000446914 387 ntBASIC22.74■■□□□ 1.23
MSH5O43196 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC22.74■■□□□ 1.23
MSH5O43196 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC22.74■■□□□ 1.23
MSH5O43196 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC22.74■■□□□ 1.23
MSH5O43196 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC22.74■■□□□ 1.23
MSH5O43196 AC068987.2-201ENST00000565518 896 ntBASIC22.74■■□□□ 1.23
MSH5O43196 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.74■■□□□ 1.23
MSH5O43196 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
MSH5O43196 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC22.74■■□□□ 1.23
MSH5O43196 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
MSH5O43196 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC22.74■■□□□ 1.23
MSH5O43196 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
MSH5O43196 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
MSH5O43196 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
MSH5O43196 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MSH5O43196 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC22.74■■□□□ 1.23
MSH5O43196 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
MSH5O43196 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 AC023824.1-201ENST00000562945 2975 ntBASIC22.73■■□□□ 1.23
MSH5O43196 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 AL354892.3-201ENST00000586101 1630 ntBASIC22.73■■□□□ 1.23
MSH5O43196 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
MSH5O43196 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.73■■□□□ 1.23
MSH5O43196 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 CLDN10-AS1-201ENST00000416909 895 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 AC008443.1-204ENST00000417281 629 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 AL121972.2-202ENST00000429386 586 ntTSL 4 BASIC22.73■■□□□ 1.23
MSH5O43196 AP000542.1-201ENST00000448473 371 ntBASIC22.73■■□□□ 1.23
MSH5O43196 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 AC119751.4-201ENST00000507498 357 ntBASIC22.73■■□□□ 1.23
MSH5O43196 MTND2P32-201ENST00000521584 1038 ntBASIC22.73■■□□□ 1.23
MSH5O43196 SAA2-203ENST00000526900 687 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC22.73■■□□□ 1.23
MSH5O43196 RAD51AP1-213ENST00000544927 787 ntTSL 4 BASIC22.73■■□□□ 1.23
MSH5O43196 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 AC004449.1-201ENST00000564240 433 ntBASIC22.73■■□□□ 1.23
MSH5O43196 AC007342.1-201ENST00000565073 706 ntTSL 3 BASIC22.73■■□□□ 1.23
MSH5O43196 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 AP005202.1-202ENST00000583065 748 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 SUZ12P1-207ENST00000583950 741 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 BNIP3P27-201ENST00000599991 412 ntBASIC22.73■■□□□ 1.23
MSH5O43196 PCA3_2.1-201ENST00000612507 409 ntBASIC22.73■■□□□ 1.23
MSH5O43196 EAPP-205ENST00000618169 1237 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 AC026336.4-201ENST00000624565 1050 ntBASIC22.73■■□□□ 1.23
MSH5O43196 AC010480.1-201ENST00000624823 684 ntBASIC22.73■■□□□ 1.23
MSH5O43196 MIR3974-201ENST00000637126 96 ntBASIC22.73■■□□□ 1.23
MSH5O43196 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC22.73■■□□□ 1.23
MSH5O43196 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC22.73■■□□□ 1.23
MSH5O43196 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
MSH5O43196 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MSH5O43196 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC22.72■■□□□ 1.23
MSH5O43196 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC22.72■■□□□ 1.23
MSH5O43196 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MSH5O43196 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MSH5O43196 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
MSH5O43196 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
MSH5O43196 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC22.72■■□□□ 1.23
MSH5O43196 CD99-202ENST00000381180 530 ntTSL 2 BASIC22.72■■□□□ 1.23
MSH5O43196 RNU6-925P-201ENST00000384629 104 ntBASIC22.72■■□□□ 1.23
MSH5O43196 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC22.72■■□□□ 1.23
MSH5O43196 AC007967.3-201ENST00000434308 558 ntBASIC22.72■■□□□ 1.23
MSH5O43196 MKNK2P1-201ENST00000437526 628 ntBASIC22.72■■□□□ 1.23
MSH5O43196 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC22.72■■□□□ 1.23
MSH5O43196 AC010374.2-201ENST00000512933 535 ntBASIC22.72■■□□□ 1.23
MSH5O43196 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC22.72■■□□□ 1.23
MSH5O43196 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC22.72■■□□□ 1.23
MSH5O43196 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC22.72■■□□□ 1.23
MSH5O43196 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC22.72■■□□□ 1.23
MSH5O43196 AC027612.4-201ENST00000605371 583 ntBASIC22.72■■□□□ 1.23
MSH5O43196 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC22.72■■□□□ 1.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms