Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 GCK-209ENST00000616242 2260 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 METTL21AP1-201ENST00000438852 635 ntBASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 RNA5SP410-201ENST00000516285 106 ntBASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 AC026150.2-201ENST00000564693 1156 ntBASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 AC006449.6-201ENST00000612330 2296 ntBASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PCDHGC4Q9Y5F7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 SPDYE14P-201ENST00000442619 822 ntBASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 AC004449.1-201ENST00000564240 433 ntBASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 RARRES2P9-201ENST00000565168 469 ntBASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
PCDHGC4Q9Y5F7 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 GSAP-201ENST00000257626 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 FAM220BP-201ENST00000377689 816 ntBASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 HLA-H-201ENST00000383620 1096 ntBASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.46■□□□□ 0.23
PCDHGC4Q9Y5F7 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms