Protein–RNA interactions for Protein: Q9Y5E2

PCDHB7, Protocadherin beta-7, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB7Q9Y5E2 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AL136982.4-201ENST00000437689 1740 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AC005332.8-201ENST00000622750 2735 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 ELK1P1-201ENST00000485699 580 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 KRT17P8-201ENST00000540749 863 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AC092337.1-201ENST00000568699 1129 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 CTBP2P3-201ENST00000585629 1255 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 CYP4F24P-201ENST00000586049 1580 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 AC106820.2-201ENST00000563775 3264 ntBASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
PCDHB7Q9Y5E2 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 GGT3P-204ENST00000453783 1664 ntBASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 RN7SL837P-201ENST00000463010 287 ntBASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 RAB43P1-201ENST00000561790 589 ntBASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 AC106886.1-201ENST00000568660 600 ntBASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
PCDHB7Q9Y5E2 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
PCDHB7Q9Y5E2 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 AC005915.1-201ENST00000624912 2018 ntBASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 AC112492.5-201ENST00000421897 457 ntBASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 HLA-V-201ENST00000429037 534 ntBASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 TTTY23B-201ENST00000442790 549 ntBASIC17.45■□□□□ 0.38
PCDHB7Q9Y5E2 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms