Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AL031008.1-201ENST00000619963 541 ntBASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
LRTM1Q9HBL6 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 HLA-DQB2-231ENST00000435145 2026 ntBASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TCAP-202ENST00000578283 583 ntTSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC15.75■□□□□ 0.11
LRTM1Q9HBL6 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 TSPY26P-202ENST00000565928 3884 ntBASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 CRYGEP-201ENST00000412192 528 ntBASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 IGLL3P-201ENST00000412472 434 ntBASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 AP002469.2-201ENST00000531724 424 ntBASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC15.74■□□□□ 0.11
LRTM1Q9HBL6 PKD1P5-201ENST00000532415 10291 ntBASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms