Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 FO681548.1-201ENST00000455617 1132 ntBASIC16.54■□□□□ 0.24
PHOX2BQ99453 PGAP2-209ENST00000464261 830 ntTSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 RN7SL618P-201ENST00000477850 296 ntBASIC16.54■□□□□ 0.24
PHOX2BQ99453 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 AC091917.2-201ENST00000505002 744 ntBASIC16.54■□□□□ 0.24
PHOX2BQ99453 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
PHOX2BQ99453 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.54■□□□□ 0.24
PHOX2BQ99453 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 LBX2-201ENST00000341396 886 ntTSL 3 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 IGHV3-21-201ENST00000390607 430 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC114501.2-201ENST00000439631 535 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 MTND4LP12-201ENST00000448237 295 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 NEU3-202ENST00000526068 431 ntTSL 2 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC105129.2-201ENST00000559536 390 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC233724.13-201ENST00000598383 410 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 AL031670.1-201ENST00000619343 669 ntTSL 3 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC128714.1-201ENST00000637035 887 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 AC018695.7-201ENST00000624587 2492 ntBASIC16.53■□□□□ 0.24
PHOX2BQ99453 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PHOX2BQ99453 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PHOX2BQ99453 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHOX2BQ99453 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHOX2BQ99453 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PHOX2BQ99453 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHOX2BQ99453 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
PHOX2BQ99453 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHOX2BQ99453 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PHOX2BQ99453 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PHOX2BQ99453 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PHOX2BQ99453 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.52■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms