Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 AC097724.1-201ENST00000609581 426 ntBASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 LINC01451-201ENST00000623792 534 ntBASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
CCDC168Q8NDH2 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 PTPA-217ENST00000434095 870 ntTSL 2 BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 HIST3H2BA-201ENST00000436555 524 ntBASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 GNRHR2-203ENST00000581100 1187 ntBASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
CCDC168Q8NDH2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 C2orf27AP3-201ENST00000434123 579 ntBASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 AC120045.2-201ENST00000567334 178 ntBASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 AL354718.3-201ENST00000616414 581 ntBASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 CR382287.1-201ENST00000623954 586 ntBASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CCDC168Q8NDH2 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC134312.5-201ENST00000568031 1313 ntBASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC124283.3-201ENST00000570869 594 ntBASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC138951.2-201ENST00000623455 1161 ntBASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 C15orf48-202ENST00000396650 732 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC104784.1-201ENST00000473096 294 ntBASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CCDC168Q8NDH2 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC13.5□□□□□ -0.25
CCDC168Q8NDH2 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms