Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 MIR4259-201ENST00000584466 101 ntBASIC17.33■□□□□ 0.36
RNF135Q8IUD6 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 AC008494.3-201ENST00000606615 944 ntBASIC17.33■□□□□ 0.36
RNF135Q8IUD6 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RNF135Q8IUD6 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 AL353732.1-201ENST00000569618 1459 ntBASIC17.32■□□□□ 0.36
RNF135Q8IUD6 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 FAM86MP-201ENST00000340703 885 ntBASIC17.32■□□□□ 0.36
RNF135Q8IUD6 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 NME6-203ENST00000415644 849 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.32■□□□□ 0.36
RNF135Q8IUD6 FRMD8P1-201ENST00000440433 1524 ntBASIC17.31■□□□□ 0.36
RNF135Q8IUD6 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 ZNF138-201ENST00000307355 1141 ntAPPRIS ALT2 TSL 4 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HCG4-201ENST00000418983 998 ntBASIC17.31■□□□□ 0.36
RNF135Q8IUD6 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AC135586.1-201ENST00000539323 574 ntBASIC17.31■□□□□ 0.36
RNF135Q8IUD6 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 WASH4P-201ENST00000564273 1246 ntBASIC17.31■□□□□ 0.36
RNF135Q8IUD6 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 CHCHD2P3-201ENST00000603038 451 ntBASIC17.31■□□□□ 0.36
RNF135Q8IUD6 SPTSSB-204ENST00000617024 1292 ntBASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RNF135Q8IUD6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms