Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 AL033527.5-202ENST00000641632 1098 ntBASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
UBE3BQ7Z3V4 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 CYP4F24P-201ENST00000586049 1580 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 CRTC2-202ENST00000368630 1635 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 CRB3P1-201ENST00000449338 276 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 ZNF890P-202ENST00000530367 1156 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AC135586.1-201ENST00000539323 574 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AF228730.6-201ENST00000641497 218 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AC084121.3-201ENST00000641716 218 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AC105233.6-201ENST00000642093 218 ntBASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.25■□□□□ 0.83
UBE3BQ7Z3V4 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 SERBP1P3-201ENST00000459980 809 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 AC004233.3-201ENST00000607794 1269 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 AC004790.1-201ENST00000612686 536 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
UBE3BQ7Z3V4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
UBE3BQ7Z3V4 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms