Protein–RNA interactions for Protein: P35125

USP6, Ubiquitin carboxyl-terminal hydrolase 6, humanhuman

Predictions only

Length 1,406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6P35125 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
USP6P35125 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC21.72■■□□□ 1.07
USP6P35125 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC21.72■■□□□ 1.07
USP6P35125 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.72■■□□□ 1.07
USP6P35125 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.72■■□□□ 1.07
USP6P35125 AC133539.2-201ENST00000604757 467 ntBASIC21.72■■□□□ 1.07
USP6P35125 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
USP6P35125 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 AC005052.1-201ENST00000625181 2492 ntBASIC21.72■■□□□ 1.07
USP6P35125 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
USP6P35125 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
USP6P35125 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC21.72■■□□□ 1.07
USP6P35125 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6P35125 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC21.72■■□□□ 1.07
USP6P35125 USP40-206ENST00000443711 628 ntTSL 2 BASIC21.72■■□□□ 1.07
USP6P35125 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC21.72■■□□□ 1.07
USP6P35125 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
USP6P35125 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6P35125 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6P35125 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
USP6P35125 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 FAM86MP-201ENST00000340703 885 ntBASIC21.71■■□□□ 1.07
USP6P35125 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
USP6P35125 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC21.71■■□□□ 1.07
USP6P35125 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC21.71■■□□□ 1.07
USP6P35125 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC21.71■■□□□ 1.07
USP6P35125 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC21.71■■□□□ 1.07
USP6P35125 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC21.71■■□□□ 1.07
USP6P35125 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC21.71■■□□□ 1.07
USP6P35125 SLC25A47P1-201ENST00000531577 414 ntBASIC21.71■■□□□ 1.07
USP6P35125 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 AL049840.4-201ENST00000602422 811 ntBASIC21.71■■□□□ 1.07
USP6P35125 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC21.71■■□□□ 1.07
USP6P35125 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC21.71■■□□□ 1.07
USP6P35125 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
USP6P35125 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC21.7■■□□□ 1.07
USP6P35125 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC21.7■■□□□ 1.07
USP6P35125 EML3-212ENST00000494176 2901 ntTSL 2 BASIC21.7■■□□□ 1.07
USP6P35125 EML3-216ENST00000529309 2909 ntTSL 2 BASIC21.7■■□□□ 1.07
USP6P35125 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC21.7■■□□□ 1.07
USP6P35125 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.07
USP6P35125 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC21.7■■□□□ 1.06
USP6P35125 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 AC134407.2-201ENST00000625089 1978 ntBASIC21.7■■□□□ 1.06
USP6P35125 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC21.7■■□□□ 1.06
USP6P35125 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
USP6P35125 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC21.7■■□□□ 1.06
USP6P35125 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC21.7■■□□□ 1.06
USP6P35125 CTBP2P5-201ENST00000454986 1264 ntBASIC21.7■■□□□ 1.06
USP6P35125 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC21.7■■□□□ 1.06
USP6P35125 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC21.7■■□□□ 1.06
USP6P35125 AC068587.3-201ENST00000526613 355 ntBASIC21.7■■□□□ 1.06
USP6P35125 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
USP6P35125 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC21.7■■□□□ 1.06
USP6P35125 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
USP6P35125 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
USP6P35125 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms