Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HOXC8P31273 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
HOXC8P31273 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HOXC8P31273 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC17.59■□□□□ 0.41
HOXC8P31273 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXC8P31273 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC17.58■□□□□ 0.41
HOXC8P31273 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXC8P31273 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXC8P31273 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.58■□□□□ 0.41
HOXC8P31273 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HOXC8P31273 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC8P31273 PKIG-203ENST00000372887 769 ntTSL 3 BASIC17.58■□□□□ 0.4
HOXC8P31273 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 KRT18P64-201ENST00000434946 1219 ntBASIC17.58■□□□□ 0.4
HOXC8P31273 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC17.58■□□□□ 0.4
HOXC8P31273 HNRNPA1P13-201ENST00000510646 963 ntBASIC17.58■□□□□ 0.4
HOXC8P31273 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC8P31273 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC8P31273 HNRNPUP1-201ENST00000554987 333 ntBASIC17.58■□□□□ 0.4
HOXC8P31273 BTNL10-201ENST00000595971 695 ntBASIC17.58■□□□□ 0.4
HOXC8P31273 COX11-210ENST00000639671 696 ntBASIC17.58■□□□□ 0.4
HOXC8P31273 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
HOXC8P31273 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 SLC22A16-202ENST00000368919 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
HOXC8P31273 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
HOXC8P31273 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.58■□□□□ 0.4
HOXC8P31273 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC8P31273 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 ACTG1P3-201ENST00000431775 1114 ntBASIC17.57■□□□□ 0.4
HOXC8P31273 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC17.57■□□□□ 0.4
HOXC8P31273 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 AP005482.1-201ENST00000563722 1273 ntBASIC17.57■□□□□ 0.4
HOXC8P31273 MIR5189-201ENST00000577370 114 ntBASIC17.57■□□□□ 0.4
HOXC8P31273 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.57■□□□□ 0.4
HOXC8P31273 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC17.57■□□□□ 0.4
HOXC8P31273 MIR6775-201ENST00000617557 69 ntBASIC17.57■□□□□ 0.4
HOXC8P31273 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC17.57■□□□□ 0.4
HOXC8P31273 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HOXC8P31273 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
HOXC8P31273 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 PDE6G-204ENST00000573076 1505 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
HOXC8P31273 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 AC020763.4-201ENST00000623414 4170 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HOXC8P31273 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 BOLA2P3-201ENST00000404566 256 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXC8P31273 AL162726.2-201ENST00000438986 1017 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 USP40-206ENST00000443711 628 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 CROCCP4-201ENST00000457096 498 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXC8P31273 FAM86LP-201ENST00000478302 853 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
HOXC8P31273 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC17.56■□□□□ 0.4
HOXC8P31273 AC124283.3-201ENST00000570869 594 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC17.56■□□□□ 0.4
HOXC8P31273 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC8P31273 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC17.56■□□□□ 0.4
HOXC8P31273 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC17.56■□□□□ 0.4
HOXC8P31273 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms