Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.81□□□□□ -0.04
GDF1P27539 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.81□□□□□ -0.04
GDF1P27539 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
GDF1P27539 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
GDF1P27539 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC14.81□□□□□ -0.04
GDF1P27539 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 FLJ38576-201ENST00000623820 2459 ntBASIC14.81□□□□□ -0.04
GDF1P27539 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
GDF1P27539 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC14.81□□□□□ -0.04
GDF1P27539 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GDF1P27539 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
GDF1P27539 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC14.8□□□□□ -0.04
GDF1P27539 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC14.8□□□□□ -0.04
GDF1P27539 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.8□□□□□ -0.04
GDF1P27539 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 SPCS2P1-201ENST00000561636 679 ntBASIC14.8□□□□□ -0.04
GDF1P27539 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC14.8□□□□□ -0.04
GDF1P27539 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC14.8□□□□□ -0.04
GDF1P27539 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 AL390955.2-201ENST00000603032 514 ntBASIC14.8□□□□□ -0.04
GDF1P27539 AC073592.8-201ENST00000624126 511 ntBASIC14.8□□□□□ -0.04
GDF1P27539 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 AC092171.3-201ENST00000610122 2651 ntBASIC14.8□□□□□ -0.04
GDF1P27539 AC011676.5-201ENST00000624864 2660 ntBASIC14.8□□□□□ -0.04
GDF1P27539 AL035456.1-201ENST00000456064 1369 ntBASIC14.8□□□□□ -0.04
GDF1P27539 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 AC079328.2-201ENST00000561241 3354 ntBASIC14.8□□□□□ -0.04
GDF1P27539 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
GDF1P27539 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC14.8□□□□□ -0.04
GDF1P27539 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
GDF1P27539 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
GDF1P27539 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
GDF1P27539 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
GDF1P27539 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC14.79□□□□□ -0.04
GDF1P27539 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms