Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.04□□□□□ -0.16
CCL1P22362 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC14.04□□□□□ -0.16
CCL1P22362 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 PRYP6-201ENST00000514804 343 ntBASIC14.04□□□□□ -0.16
CCL1P22362 PENK-208ENST00000523051 772 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 AC034105.1-201ENST00000563488 319 ntBASIC14.04□□□□□ -0.16
CCL1P22362 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL1P22362 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.04□□□□□ -0.16
CCL1P22362 AC064836.3-201ENST00000607928 673 ntBASIC14.04□□□□□ -0.16
CCL1P22362 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCL1P22362 GABRA5-202ENST00000355395 2183 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 PMS2P7-201ENST00000506558 1336 ntBASIC14.04□□□□□ -0.16
CCL1P22362 BCAR1-209ENST00000546196 1340 ntBASIC14.04□□□□□ -0.16
CCL1P22362 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC14.04□□□□□ -0.16
CCL1P22362 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
CCL1P22362 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
CCL1P22362 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CCL1P22362 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC14.03□□□□□ -0.16
CCL1P22362 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 YTHDF1-202ENST00000370339 3301 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL1P22362 MDH2-205ENST00000461263 648 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC14.03□□□□□ -0.16
CCL1P22362 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL1P22362 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC14.03□□□□□ -0.16
CCL1P22362 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC14.03□□□□□ -0.16
CCL1P22362 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC14.03□□□□□ -0.16
CCL1P22362 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
CCL1P22362 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC14.03□□□□□ -0.16
CCL1P22362 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
CCL1P22362 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms