Protein–RNA interactions for Protein: O43638

FOXS1, Forkhead box protein S1, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXS1O43638 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
FOXS1O43638 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXS1O43638 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 AL136982.4-201ENST00000437689 1740 ntBASIC15.31■□□□□ 0.04
FOXS1O43638 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC15.31■□□□□ 0.04
FOXS1O43638 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
FOXS1O43638 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
FOXS1O43638 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXS1O43638 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXS1O43638 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXS1O43638 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXS1O43638 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXS1O43638 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXS1O43638 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXS1O43638 AC245100.5-201ENST00000452108 331 ntBASIC15.3■□□□□ 0.04
FOXS1O43638 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC15.3■□□□□ 0.04
FOXS1O43638 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC15.3■□□□□ 0.04
FOXS1O43638 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXS1O43638 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
FOXS1O43638 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.3■□□□□ 0.04
FOXS1O43638 AC006449.5-201ENST00000610658 2098 ntBASIC15.3■□□□□ 0.04
FOXS1O43638 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC15.3■□□□□ 0.04
FOXS1O43638 AL390754.1-201ENST00000619088 582 ntBASIC15.3■□□□□ 0.04
FOXS1O43638 CETN4P-206ENST00000642099 2168 ntBASIC15.3■□□□□ 0.04
FOXS1O43638 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 PCDH8P1-201ENST00000428983 2773 ntBASIC15.3■□□□□ 0.04
FOXS1O43638 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
FOXS1O43638 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
FOXS1O43638 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
FOXS1O43638 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 AC100757.3-201ENST00000622361 1406 ntBASIC15.29■□□□□ 0.04
FOXS1O43638 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
FOXS1O43638 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXS1O43638 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC15.29■□□□□ 0.04
FOXS1O43638 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.29■□□□□ 0.04
FOXS1O43638 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC15.29■□□□□ 0.04
FOXS1O43638 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC15.29■□□□□ 0.04
FOXS1O43638 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
FOXS1O43638 TEX28P1-201ENST00000613479 1221 ntBASIC15.29■□□□□ 0.04
FOXS1O43638 TEX28P2-201ENST00000617764 1221 ntBASIC15.29■□□□□ 0.04
FOXS1O43638 AL590560.3-201ENST00000623350 461 ntBASIC15.29■□□□□ 0.04
FOXS1O43638 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
FOXS1O43638 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC15.29■□□□□ 0.04
FOXS1O43638 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms