Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 AC087499.5-201ENST00000452760 1342 ntBASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 HLA-J-202ENST00000469281 1241 ntBASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CTDP1Q9Y5B0 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 MRPS18AP1-201ENST00000414458 589 ntBASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 AL079307.3-201ENST00000556114 283 ntBASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 PCGF3-213ENST00000620529 1899 ntBASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.86■□□□□ 0.61
CTDP1Q9Y5B0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 AC005915.1-201ENST00000624912 2018 ntBASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 PIN1P1-201ENST00000412108 996 ntBASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 AURKB-214ENST00000585124 1227 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 PCDHB18P-201ENST00000524813 2368 ntBASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
CTDP1Q9Y5B0 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CTDP1Q9Y5B0 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms