Protein–RNA interactions for Protein: Q9UPU3

SORCS3, VPS10 domain-containing receptor SorCS3, humanhuman

Predictions only

Length 1,222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SORCS3Q9UPU3 AP001350.2-201ENST00000625104 1094 ntBASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
SORCS3Q9UPU3 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 AC116353.5-201ENST00000638148 1699 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 AC087499.6-201ENST00000411576 835 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 DFFBP1-201ENST00000433250 979 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 AC104794.3-201ENST00000566840 1248 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TEX28P1-201ENST00000613479 1221 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TEX28P2-201ENST00000617764 1221 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 AL391825.1-201ENST00000457671 1364 ntBASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC17.23■□□□□ 0.35
SORCS3Q9UPU3 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 MIR658-201ENST00000385210 100 ntBASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AC079776.1-201ENST00000401540 1152 ntBASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AL844908.2-201ENST00000609461 460 ntBASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 CETN4P-206ENST00000642099 2168 ntBASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SORCS3Q9UPU3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SORCS3Q9UPU3 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms