Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
VTA1Q9NP79 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.17■□□□□ 0.5
VTA1Q9NP79 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TMEM26-AS1-201ENST00000389640 863 ntTSL 5 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 AC245100.5-201ENST00000452108 331 ntBASIC18.16■□□□□ 0.5
VTA1Q9NP79 RN7SL837P-201ENST00000463010 287 ntBASIC18.16■□□□□ 0.5
VTA1Q9NP79 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 CTBP2P3-201ENST00000585629 1255 ntBASIC18.16■□□□□ 0.5
VTA1Q9NP79 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
VTA1Q9NP79 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
VTA1Q9NP79 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 DEK-201ENST00000244776 1441 ntTSL 2 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 AC078925.2-201ENST00000624013 1973 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 AC004987.2-201ENST00000395959 1148 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 AC098850.1-201ENST00000419919 790 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 GLI4-203ENST00000517468 963 ntTSL 5 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 NEU3-203ENST00000529024 581 ntTSL 3 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 RARRES2P5-201ENST00000564013 466 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 IFT20-216ENST00000588477 774 ntTSL 5 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 TMEM261P1-201ENST00000604899 340 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 Z97205.2-201ENST00000564697 1639 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC18.15■□□□□ 0.5
VTA1Q9NP79 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
VTA1Q9NP79 AL691432.1-201ENST00000596308 1422 ntBASIC18.15■□□□□ 0.5
VTA1Q9NP79 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VTA1Q9NP79 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VTA1Q9NP79 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC18.14■□□□□ 0.5
VTA1Q9NP79 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.5
VTA1Q9NP79 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
VTA1Q9NP79 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC18.14■□□□□ 0.5
VTA1Q9NP79 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
VTA1Q9NP79 AL592424.1-201ENST00000563624 1536 ntBASIC18.14■□□□□ 0.49
VTA1Q9NP79 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC18.14■□□□□ 0.49
VTA1Q9NP79 HMGA1-204ENST00000401473 1887 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.14■□□□□ 0.49
VTA1Q9NP79 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC18.14■□□□□ 0.49
VTA1Q9NP79 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
VTA1Q9NP79 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC18.14■□□□□ 0.49
VTA1Q9NP79 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
VTA1Q9NP79 MXI1-205ENST00000393134 889 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms