Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC15.66■□□□□ 0.1
BRF2Q9HAW0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AC010491.1-201ENST00000563101 2797 ntBASIC15.65■□□□□ 0.1
BRF2Q9HAW0 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AC112191.1-201ENST00000523689 701 ntBASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 PIN1-206ENST00000587625 878 ntTSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AC120114.3-201ENST00000611923 658 ntBASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 ACE-203ENST00000413513 2237 ntTSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
BRF2Q9HAW0 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AL589702.1-201ENST00000641229 1509 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 MED15P5-201ENST00000423150 992 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 KRT18P3-201ENST00000451602 1288 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 PRYP6-201ENST00000514804 343 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AC008677.1-201ENST00000519230 1561 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AC002347.1-201ENST00000569543 541 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AL121894.2-201ENST00000602977 491 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AC140113.2-201ENST00000604370 208 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 PMS2P7-201ENST00000506558 1336 ntBASIC15.64■□□□□ 0.09
BRF2Q9HAW0 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
BRF2Q9HAW0 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
BRF2Q9HAW0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms