Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 AL365330.1-201ENST00000607459 531 ntBASIC13.6□□□□□ -0.23
GAFA1Q96PS6 AC139530.3-201ENST00000620344 690 ntBASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 SP100-205ENST00000409824 1802 ntTSL 5 BASIC13.6□□□□□ -0.23
GAFA1Q96PS6 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 AC023141.5-201ENST00000458585 616 ntBASIC13.59□□□□□ -0.23
GAFA1Q96PS6 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 METTL23-205ENST00000588302 925 ntTSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 AC009093.7-201ENST00000623853 1223 ntBASIC13.59□□□□□ -0.23
GAFA1Q96PS6 AC079781.4-201ENST00000641908 219 ntBASIC13.59□□□□□ -0.23
GAFA1Q96PS6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
GAFA1Q96PS6 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC13.58□□□□□ -0.23
GAFA1Q96PS6 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
GAFA1Q96PS6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
GAFA1Q96PS6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC13.58□□□□□ -0.23
GAFA1Q96PS6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
GAFA1Q96PS6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
GAFA1Q96PS6 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
GAFA1Q96PS6 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 FAM220BP-201ENST00000377689 816 ntBASIC13.58□□□□□ -0.24
GAFA1Q96PS6 HLA-H-201ENST00000383620 1096 ntBASIC13.58□□□□□ -0.24
GAFA1Q96PS6 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 RNA5SP410-201ENST00000516285 106 ntBASIC13.58□□□□□ -0.24
GAFA1Q96PS6 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 AC027612.4-201ENST00000605371 583 ntBASIC13.58□□□□□ -0.24
GAFA1Q96PS6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.58□□□□□ -0.24
GAFA1Q96PS6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms