Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRIM47Q96LD4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 EGFEM1P-202ENST00000431685 1563 ntBASIC19.1■□□□□ 0.65
TRIM47Q96LD4 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 AL035456.1-201ENST00000456064 1369 ntBASIC19.1■□□□□ 0.65
TRIM47Q96LD4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 RN7SL752P-201ENST00000463779 287 ntBASIC19.1■□□□□ 0.65
TRIM47Q96LD4 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 AC104794.3-201ENST00000566840 1248 ntBASIC19.1■□□□□ 0.65
TRIM47Q96LD4 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 AL606495.2-201ENST00000605867 535 ntBASIC19.1■□□□□ 0.65
TRIM47Q96LD4 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC19.1■□□□□ 0.65
TRIM47Q96LD4 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 CA12-203ENST00000422263 2556 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 AC092068.3-201ENST00000587894 2016 ntBASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 AL034550.1-201ENST00000442179 986 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 Six3os1_5.1-201ENST00000611000 271 ntBASIC19.09■□□□□ 0.65
TRIM47Q96LD4 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRIM47Q96LD4 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC19.08■□□□□ 0.65
TRIM47Q96LD4 AP006294.1-201ENST00000415407 339 ntBASIC19.08■□□□□ 0.64
TRIM47Q96LD4 AC112492.5-201ENST00000421897 457 ntBASIC19.08■□□□□ 0.64
TRIM47Q96LD4 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC19.08■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms