Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 HLA-J-202ENST00000469281 1241 ntBASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 AC109635.5-201ENST00000533593 962 ntBASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 AC092171.3-201ENST00000610122 2651 ntBASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.7□□□□□ -0.22
C11orf42Q8N5U0 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 FIS1-203ENST00000442303 631 ntTSL 3 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 AC112482.1-201ENST00000492080 688 ntBASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 AP000777.2-201ENST00000539897 501 ntTSL 4 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CD7-202ENST00000578509 925 ntTSL 3 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 AL031055.1-201ENST00000606362 631 ntBASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 C20orf181-201ENST00000623918 480 ntBASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC13.69□□□□□ -0.22
C11orf42Q8N5U0 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.68□□□□□ -0.22
C11orf42Q8N5U0 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms