Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 EMC4-209ENST00000559421 497 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 DERL2-202ENST00000570848 657 ntTSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 RHOXF1P1-202ENST00000635473 501 ntBASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 BAATP1-201ENST00000412284 1225 ntBASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 CNN2P8-201ENST00000421872 913 ntBASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 KLK4-202ENST00000431178 481 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC15.1■□□□□ 0.01
COL27A1Q8IZC6 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 ZBTB45P2-201ENST00000452245 1531 ntBASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 AC026954.1-201ENST00000429771 1293 ntBASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 AL139099.5-201ENST00000635274 300 ntBASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
COL27A1Q8IZC6 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 PHKG1P2-201ENST00000457537 863 ntBASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 AC093433.1-201ENST00000458048 571 ntBASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 KRT18P43-201ENST00000469825 1281 ntBASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.08■□□□□ 0.01
COL27A1Q8IZC6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 AC134407.2-201ENST00000625089 1978 ntBASIC15.08■□□□□ 0
COL27A1Q8IZC6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.08■□□□□ 0
COL27A1Q8IZC6 AC092933.1-201ENST00000393644 945 ntBASIC15.08■□□□□ 0
COL27A1Q8IZC6 AC004945.1-201ENST00000416738 983 ntBASIC15.08■□□□□ 0
COL27A1Q8IZC6 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC15.08■□□□□ 0
COL27A1Q8IZC6 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.08■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms