Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 AC023157.3-201ENST00000619086 2088 ntBASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 AC139887.3-201ENST00000568585 713 ntBASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 AP001350.2-201ENST00000625104 1094 ntBASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ZNF662-201ENST00000328199 3186 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
LRRTM1Q86UE6 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 KRT16P4-201ENST00000453883 522 ntBASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 ARTN-206ENST00000472435 402 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 NPAP1P7-201ENST00000613027 823 ntBASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 AC020658.6-201ENST00000623564 1870 ntBASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
LRRTM1Q86UE6 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 IER3-202ENST00000376377 1350 ntBASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
LRRTM1Q86UE6 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms