Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
HERC4Q5GLZ8 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 AC002056.1-201ENST00000395613 760 ntBASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 HLA-DRB6-201ENST00000411500 1235 ntBASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 POU5F1P6-201ENST00000466990 990 ntBASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 AC005225.4-201ENST00000557330 545 ntBASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 CITED2-204ENST00000618718 901 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 DOC2GP-204ENST00000639052 2548 ntBASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 CYP2T1P-202ENST00000641596 2535 ntBASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
HERC4Q5GLZ8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 TNRC18P3-201ENST00000441896 2691 ntBASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AC016027.1-202ENST00000607927 1699 ntBASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 FAM58CP-201ENST00000435741 640 ntBASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 AC005622.1-201ENST00000636801 1703 ntBASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
HERC4Q5GLZ8 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 KRT18P34-201ENST00000488218 1270 ntBASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 AC112191.1-201ENST00000523689 701 ntBASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 AQP6-203ENST00000551733 849 ntTSL 3 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 FXYD1-208ENST00000589209 428 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 FXYD1-211ENST00000612146 690 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
HERC4Q5GLZ8 AL161645.1-201ENST00000622716 1255 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms